SOCR Data Oct2009 ID NI

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(Data)
(Data Description)
Line 10: Line 10:
* Subject: Subject identifier
* Subject: Subject identifier
* Age: Subject Age
* Age: Subject Age
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* DX: Subject diagnosis (Normals=1; Schizophrenia=2)
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* DX: Subject diagnosis (Normals=0; Schizophrenia=1)
* Sex: Subject gender (Male=1; female=2)
* Sex: Subject gender (Male=1; female=2)
* FS_IQ: Subject Intelligence Quotient (IQ)
* FS_IQ: Subject Intelligence Quotient (IQ)

Revision as of 23:26, 7 May 2013

Contents

SOCR Datasets - Normal and Schizophrenia Neuroimaging study of Children

Data Overview

Children Neuroimaging Data

This is a neuroimaging study of childhood-onset schizophrenia. It uses automated volumetric data processing to obtain different volume measures of local anatomy for schizophrenia patients and age-matched normal controls. The goals of the study were to identify associations and relationships between neuroimaging biomarkers and various subject demographics and traits.

SOCR Charts and SOCR MotionCharts may be used to render dynamic visualizations of these data. SOCR Charts help is available here. SOCR Analyses (e.g., Multivariate Regression Analysis, ANOVA, etc.) may be used to fit models and quantitative assessment of relations between different variables. SOCR Analyses help is available here.

Data Description

  • Subject: Subject identifier
  • Age: Subject Age
  • DX: Subject diagnosis (Normals=0; Schizophrenia=1)
  • Sex: Subject gender (Male=1; female=2)
  • FS_IQ: Subject Intelligence Quotient (IQ)
  • The following neuroimaging-derived biomarkers were computed using the following workflow protocols via the LONI Pipeline: BrainParser (56 ROI/Structures), Automated ROI Extraction/Volume Calculation, and Automatic Tissue Classification v1:
    • TBV: Total Brain Volume (mm3)
    • GMV: Total Gray Matter Volume (mm3)
    • WMV: Total White Matter Volume (mm3)
    • CSF: Total Cerebrospinal Fluid (mm3)
    • Background: Background volume (mm3)
    • L_superior_frontal_gyrus, R_superior_frontal_gyrus, ..., brainstem: 56 regional cortical and subcortical volumes (region anatomical names are encoded in the column heading).
  • Note: The following represent the mean ranges for the global brain tissue types for normal adults in cubic centimeters.
Tissue type Mean volume (cm3) Range [Min-Max] (cm3)
CSF 211.3 167.4–297.5
GM 743.9 646.9–889.4
WM 508.8 413.6–677.3
TBV 1252.7 1071.2–1566.7
ICV 1464.1 1273.3–1864.2

Data

SubjectAgeDXSexFS_IQTBVGMVWMVCSFBackgroundL_superior_frontal_gyrusR_superior_frontal_gyrusL_middle_frontal_gyrusR_middle_frontal_gyrusL_inferior_frontal_gyrusR_inferior_frontal_gyrusL_precentral_gyrusR_precentral_gyrusL_middle_orbitofrontal_gyrusR_middle_orbitofrontal_gyrusL_lateral_orbitofrontal_gyrusR_lateral_orbitofrontal_gyrusL_gyrus_rectusR_gyrus_rectusL_postcentral_gyrusR_postcentral_gyrusL_superior_parietal_gyrusR_superior_parietal_gyrusL_supramarginal_gyrusR_supramarginal_gyrusL_angular_gyrusR_angular_gyrusL_precuneusR_precuneusL_superior_occipital_gyrusR_superior_occipital_gyrusL_middle_occipital_gyrusR_middle_occipital_gyrusL_inferior_occipital_gyrusR_inferior_occipital_gyrusL_cuneusR_cuneusL_superior_temporal_gyrusR_superior_temporal_gyrusL_middle_temporal_gyrusR_middle_temporal_gyrusL_inferior_temporal_gyrusR_inferior_temporal_gyrusL_parahippocampal_gyrusR_parahippocampal_gyrusL_lingual_gyrusR_lingual_gyrusL_fusiform_gyrusR_fusiform_gyrusL_insular_cortexR_insular_cortexL_cingulate_gyrusR_cingulate_gyrusL_caudateR_caudateL_putamenR_putamenL_hippocampus
2713.66011181663407654980.6840873.5167553.4836225167276.166078.7636616768429367.725693.230471.434527.682949723.36815.54959.921802458.823125.820692.122016.324604.3151301595517463.220256.814976.914053.76550.46878.319486.721535.38896.112040.55630.67385.631922.530222.330233.830418.923115.527490.46772.16461.315608.81819117754.51481710053.59669.616569.7165241566.52391.44555.52473.75133.6
10614.76011161583940527917.5851560204462.8858610719866.117346.411056.376766049.75124.71352.11837.3746.7533.7607.541.1329.1298.5166.6408.23850.73090.21492.41576.8476.724301724.41595.725.354.81150.71714.9587.51243.5190.9372.34117.59922.52174.82293.9715.1513.6946.1703.51862.62034.5856.41633.74523.61209.72085.12595.6142.4395.55827.11042859.6
13913.73021071299470550035.4614598.1134836.5862751015450.114219.38647.46463.16370.34772.51307.81504528.4400.8593.833.8277.4285.8163.5287.92770.73415.111771115.9312.21803.51120.11161.229.551.7931.31402.7469.31000.9173318.53152.58239.21758.21863.6528.4402.9723.5632.81378.51801.4773.11267.73884.41033.61502.91969.1143.42904789.3937.6664.5
14315.09011071535137599371.5780127.1155638.1860755015482.813941.911252.59433.16636.147641280.41681.2778.4586.4749.945.4226.8295.3183.5271.12531.23480.51269.81401.7370.21937.5826.9705.633.855.91125.41701.2536.81178.1218.3340.73534.39403.62306.62059.8653.9551.6956.6705.61611.62023.9840.61277.24079.51141.217362009.2147.7353.34546.8907892.3
17214.527021071431890593306.1695296.4143287.8861789918538.217094.410253.77201.46979.95692.11094.81607.3803.7436.6759.431.6335.4319.6159.3303.83089.23272.71016.71558.8355.42153.71103.21250.926.472.81062.11571.5525.21120.1234.1357.53803.29395.22268.62146.3735.1514.7841.6720.41721.21901.67901166.54316.81133.81602.12063159.3311.15003.4906754.1
18415.3292011001578698822056.2546394.6210246.7859351016515.415956.48550.45537.16530.64788.31202.31110.6754.1537.9721.441.1311.1478.8232299.52927.83966.71226.62087.2434.52724.31200.21326.833.8771151.71830.9602.21272260.5360.73044.993721839.41499.8601.2419.8815.3743.61475.52244.4835.31540.95076.21423.818132244.4139.2342.86233.2934.5817.4
18514.4101941453510534555.7730154.9188799.6862497817285.3150628460.76282.84791.437421199.21584.1783.6508.4562.125.3246.8264.7156.1283.724692377.3901.81110.6332.21622.11070.51076.825.371.7981.91482.9488.31078.92313283730.48867.819101823.6598435.6800.5681.31455.51626.3955.51547.24081.61188.61835.22445.8198.3313.24769.3801.6752
1989.5633011141650348608916.4860876180555.1863172218709.120008.58385.87555.89224.35770.21260.41591.5796.3439.8889.150.6297.4356.5206.7284.83642.93447.8156213704442116.81337.31297.33863.31152.81794574.81190.7220.4395.53554.39582.92227.52107.3579505.2711.9709.81306.81446627.5999.85077.31443.91691.72551.3142.4333.35511.81011.4839.5
19915.4497021071288971479706.7668575.9140687.9862961918248.215918.48063.157286346.1433912151123.2663.4428.2653.944.3320.6334.3190.9265.82845.53247.41083.21481.8320.62118.91162.31096.926.459.1951.31429.1473.61012.5160.3338.634328229.72099.91809.8664.5460.9776.26181422.81797.2762.51102.14142.81095.81645.32214.8144.5273.25018.2881.7848
40218.501951366346699476.2479997.8186871.6862483016846.515280.39105.14614.356903871.81280.41524557.9352.3570.628.5270338.6187.7278.42961.62520.7940.81451.2340.72243.31159.11051.529.569.6953.41488.2498.91037.8226.8304.83673.59362.51884.71751.8574.8379.7841.6691.91435.41572.5729.81467.14200.8948.21656.92459.5155399.75093.1742.5748.8
40317.58021091326402438889.2725968.9161544.4864108415104.213257.47878.55045.65675.34522.51180.21506.1533.7371.2586.423.2245.7374.4168.8279.52848.72553.4893.31381.6310.12026.1919.7996.728.569.69651418.6469.31027.3154362.83107.184661902.71614.7565.3412.4772613.81608.41805.6691.91090.53736.89061606.32279.2152.93854717.6865.9631.8
40617.75011251503005711923.6595506.1195574.9861560620078.116916.18347.96670.96448.44804.11007.21138637455.6584.333.8317.5544.2135197.23325.43690.4968.21091.6441.91995.51511.41489.240.151.71070.51618.9522.11146.4204.6391.34009.98512.42033.41702.3670.8480.9771630.71585.21906.9649.7970.34949.61200.21766.62455.3139.2360.75676.31054.7759.4
41016.08011081474790774131.2520734179924.486898768627.36539.16632.98385.811220.82812.94684.93939.31297.32549.22515.41220.3518.9339.64870.52393.12829.71826.71134.81712.81332.123521290.91806.7431.4395.52438.42870.91367.91306.8729.8277.414284208.21371.13160.91971.22244.41796.18492599.81455.53638.72055.61020.9966.11647.4768.911561.2279.584.4294.3
41518.41021151317156679760.9489467.8147927.3865693815477.514362.77604.36193.15617.34218.81149.61534.6627.5388.1528.430.6324.8287.9133.9273.22591.43226.3883.81050.5295.31611.61043.11226.626.466.4910.21386.9466.21018.8192296.434138391.11879.51899.5594.8396.6765.7591.71481.81697716.113303888.61108.51590.52061.9142.4241.54427.6851.1764.6
41816.5021071441045718754.8532975.8189314.3861335217329.615134.89176.85869.355744439.21341.61761.3606.4398.7621.239295.3339.6227.8296.43467.83038.61164.41085.3322.72241.21342.61334.226.4771025.21588.4522.11113.8227.8351.24142.89216.92474.32121707.7545.3750.9736.21513.51632.7724.61314.13728.3957.71762.42345.6182.5397.65078.3852.2738.3
41917.75021251463498689875.3576051.4197571.4864686820051.715972.27440.85531.87340.65017.11236.11101.1671.8403.963628.5356.5433.5170.9190.93005.93231.6971.41002377.61786.69831012.531.673.81024.11611.6491.51158222.5316.43771.675802230.71903.7658.1470.4533.7728.81166.51536.7582.21050.549171133.82125.22410178.2352.360181019.9639.1
42115.75011271650207834956.1635818.4179432.9857571621231.918429.66855.56470.561145623.61320.5890.2834.3494.6690.838470.4563.2195.11933822.23975.11391.11582620.22176.92442.72191.641.162.21238.21839.4647.61284.6239.4392.34789.39617.720642221.2663.4470.4947.1687.71901.61938.5972.41632.74853.71320.52253.92208.5176.1330.15648.91088.4805.8
42616011161523045744792.9607824.9170427858334220471.5180139033.45913.67360.75490.71089.51385.9725.6352.3784.729.5330.1380.7185.6225.734523518.41010.41055.7489.417741770.8183230.660.11108.51725.5562.11210.8214.1370.23668.28951.121402388.9739.3572.7861.7730.91627.42143.1777.31290.95087.81296.21820.42586.1220.4329.15684.8949.2723.5
42715021041441636755990.6499993.6185651.4861489117903.316595.59626.17835.35587.74796.713702102688.7426.1599.134.8266.8338.6184.6358.62860.32698.9890.21412.2345.91994.4981.91005.135.971.71025.21564.1504.11090.5206.7330.136069502.72023.92022.9642.3444733625.41457.61625.3873.31335.24118.61044.11528.22090.4151.9341.75203.8835.3713
42815.58011331432033735129.9506333.3190569.4861095415984.814382.88252.95871.47177.15685.81213.91482.9720.4450.4821.657285.8318.5193271.13268.536071102.11430.2298.51883.71184.41236.130.654.8997.71564.1527.31090.5178.23283304.39263.32222.22038.7692.9456.7867702.41634.81794768.91410.14791.41207.61656.92140215.2372.35490.7888692.9
72515.4114021091420416699546.8551241.9169627.5862033617269.516177.986405189.16835.44779.81036.81562550.5416.6570.636.9246.8343.8173305.93331.83976.21011.41230.8464.12128.41148.61165.427.462.210021586.2497.81088.4207.8341.73301.29093.52233.82251.8788.9510.5713638.11516.61777.1882.81361.64080.61148.61632.72344.6146.6323.84876.9930.2697.1
74410.6475021221480171798754.9492262.8189152.986152431803318035.28630.57108.66688.84770.41229.81589.4697.1453.5760.441.1252.1373.4185.6268.93187.326811025.21171.8411.32021.8922.9929.226.445.41076.81622.1538.91204.5229.9395.54162.99829.72173.72315547.4478.8858.5729.81443.92016.6962.912934111.21232.91744.52799.1158.2317.54947.5984925
7547.9014021271360810506954.5702941.8150913.1862327516824.414685.59453.27919.65421.14659.61344.72287.6650.7432.4564.320259.5304.8194.1388.13391.932408301249.8380.71958.61278.31278.329.548.5998.81477.6485.21069.5183.5344.93212.68924.820452195.9556.9451.4761.5642.31603.11922.7918.61287.83725.2835.31864.72234.9162.4234.15953.71110.6718.2
7659.6975021301410213496574.3779751.6133887.3861969117444.514357.58140.16350.36483.25267.11078.9949.2696.1398.7612.842.2264.7278.4175.1207.82421.63191.51104.31335.2354.41885.81287.81355.336.9581051.51822.5542.11167.5207.8361.84374.88799.32466.92088.3754.1525.2732644.41533.52113.66751183.43900.21107.41682.22493.3128.7243.64581.6795.2737.2
7718.7995011121574808620632750133.8204042860471417118.6171648517.76462.17800.55123.71404.81821.4768.9538.9768.934.8321.7440.9190.9349.13113.43001.612531463.9331.22494.314851499.832.761.21132.71727.6528.41190.7239.4432.4453310020.625081935.4709.8471.4957.7759.41772.92003.9803.71399.64260.91290.91785.62512.3156.1390.24888.5867875.4
7767.5127011011502702567365776398.8158938.3859709418548.816735.811438.17940.76483.25138.413882128.4727.7548.4658.134.8315.4376.5187.7394.52948.93098.71152.81433.3364.92188.51318.41286.735.969.61123.21664.3536.81206.6226.8431.4414610139.82534.42505.9665.5528.4767.8614.91636.91881.6939.71438.64244.11072.61913.22465.993.9262.64695.5827.9954.5
7789.0842021101203344435583.8621378.6146381.186595401265211904.37457.75775.54923.34160.71264.61528.2572.7332.2485.239236.2226.8158.2342.826432805.57911550.4257.31809.81203.4111927.459.1853.21344.7414.5912.3192286.93188.38063.11826.71422.8540383.9765.7692.91575.71758.2657.11148.63377.11000.91409.11858.4152.9296.44370.6797.3766.8
7857.909702871319737505741.6622517.7191477.5863607712422.113419.88585.267696832.35769.11106.41472.3634.9451.4583.255.9298.5275.3141.3336.43030.12687.3834.31246.6263.71573.6772782.631.645.49451381.6471.41008.3155296.42947.98066.217161591.5495.7334.3704.5555.81197.11519.86561145.44116.41047.31317.32069.394.92904092.2744.6655
80414.814501971688990745760.1727704.9215525.4856129923036.519752.210804.27933.47451.46244.813301673.8752415.5736.244.3379.7391.3168.8286.93411.93314.91191.81388523.12143.11778.21822.538581262.51841.5592.71280.4217.3428.2486010610.23753.62883.5956.6640.2974.5700.31771.91880.5923.91725.54960.21494.52031.32650.498.1353.35578.21052.6895.4
8067.701601911292641496689.3627690.9168260.6866163711966.510885.492966919.85905.24095.41014.61506.1537.9368.1512.625.3330.1312.2133.9235.22516.52449722.5896.5267.91209.7745.7816.31961.2911.21307.8448.21012.5151.9300.62982.77372.31691.71881.6454.6372.3784.7683.41461.81487.1882.8932.33352.9937.61243.51435.4113.9258.44176.6697.1622.3
8456.557201911512571540403.9836971.5135195.1860573618705.916390.910730.48046.26301.85214.414462052.4795.2496.8702.436.9366374.4183.5358.62677.92726.49251453.4358.61949.1968.21084.228.573.81122.21645.3536.81145.4204.6338.64423.410712.524102329.8705.6528.4853.2738.31448.11953.3892.31478.74752.41015.71714.92250.7126.6291.15196.4903.9876.4
89115.7618011141635918849750.1578190.3207978.185819832040517760.910579.68201.27099.15035.11274.11779.3602.2707.769461.2317.5349.1168.8317.54772.54150.21102.11241.4488.31835.22243.31964.93979.11132.71746.6552.71211.8261.6406.14884.39456.32808.62446.9816.3573.8875.4777.31724.42508989.31077.94271.51309.92084.12697.9188.8364.95579.31045.2954.5
10215.663212961331777461919.4633298.8236559.1863069615083.113487.38784.56169.95961.14597.411191726.5738.3439.8591.725.3282.7285.8178.23272325.62639.9914.41262.5329.11672.71010.4927.128.549.6978.81391.1467.21051.5188.8301.63029.18308.81880.51589.4549.5351.2678.2517.91598.91629.5778.41182.33508.99651692.82155.8220.44054768.2767.8585.4
10416.071211991487886698476.3576153.6213255.7859853122771.817827.48686.47074.87260.55269.21096.91320.5740.4434.5819.529.5341.7329.1177.2203.63058.633361127.51051.5340.71815.11625.31534.632.774.91052.61565.2525.21132.7170.9351.23936.17254.12113.61723.4562.1504.1868738.318132177.9763.61182.34143.9981.91902.72329.8190.9275.34240.9890.2832.1
11913.136212651066075327077.6613544.5125453868337813649.811672.27858.55452.74638.53581.71095.81439.6544.2330.146224.3244.7253.1136.1225.72205.42154.7631.8806.8263.71272785.7889.127.450.67721132.7401.8832.1146.62502917.36771.11692.81787.7608.6376.5640.2472.51034.61265.6621.29643155.6735.111761396.4105.5219.43652.4611.7544.2
12013.341512961297327439612.8711601.9146112.2868715513852.314470.36930.45716.45200.72881.41224.5796.3516.8336.4488.334.8185.6314.3131.8162.42701.13150.41096.9697.13091229.81029.41140.124.352.7932.31499.8467.21020.9197.2311.13253.76993.62119.91436.5687.7441.9561.1497.81005.11153.8429.3668.73668.2936.61473.41972.3116216.24317.9792.1623.3
12114.672112841499983663552.5642409.1194021.4860237118679.616327.68277.27012.67642.35231.21294.11293625.4454.6710.929.5388.1375.5125.5218.33503.72482.7919.71234436.62030.31274.11114.824.360.11083.21633.7548.41113.8243.6450.44388.69457.42167.42317.1653.9424876.4638.11319.41783.5657.11243.54587.91301.51915.32224.3168.8311.15331.4949.2799.5
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