# SOCR EduMaterials AnalysesCommandLineAnovaOneWay

(Difference between revisions)
 Revision as of 23:03, 5 March 2008 (view source) (→ANOVA - One Way Usage)← Older edit Current revision as of 17:14, 2 December 2008 (view source)Jenny (Talk | contribs) (3 intermediate revisions not shown) Line 17: Line 17: - * Example: Edit a new file (ChiSquareModelFitCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script. + * Example: Edit a new file (AnovaOneWayCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script. #!/bin/csh #!/bin/csh Line 23: Line 23: java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/ java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/ - cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla. + cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/test.txt -h - stat.SOCR.analyses.command.AnovaOneWayCSV /cxfs/ccb/CCB_SW_Tools/others/Statist + - ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/test.txt -h + date date Line 32: Line 30: ==Example Input data files== ==Example Input data files== - Two test datafiles are included with the SOCR analyses command-line distribution ('''rank1.txt''' and '''rank2.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers. + One test datafile is included with the SOCR analyses command-line distribution ('''test.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
{| class="wikitable" style="text-align:center" border="1" cellpadding="2" {| class="wikitable" style="text-align:center" border="1" cellpadding="2" |- |- - ! rank1.txt + ! test.txt - ! rank2.txt + ! |- |- - | Before + | x - | After + | y |- |- - | 27.0 + | 93.0 - | 25.0 + | 1 |- |- - | 29.0 + | 67.0 - | 25.0 + | 1 |- |- - | 37.0 + | 77.0 - | 27.0 + | 1 |- |- - | 56.0 + | 92.0 - | 44.0 + | 1 |- |- - | 46.0 + | 97.0 - | 30.0 + | 1 |- |- - | 82.0 + | 62.0 - | 67.0 + | 1 |- |- - | 57.0 + | 136.0 - | 53.0 + | 2 |- |- - | 80.0 + | 120.0 - | 53.0 + | 2 |- |- - | 61.0 + | 115.0 - | 52.0 + | 2 |- |- - | 59.0 + | 121.0 - | 60.0 + | 2 |- |- - | 43.0 + | 102.0 - | 28.0 + | 2 + |- + | 130.0 + | 2 + |- + | 198.0 + | 3 + |- + | 217.0 + | 3 + |- + | 209.0 + | 3 + |- + | 221.0 + | 3 + |- + | 190.0 + | 3 |} |}
- {{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineTwoPairSignedRank}} + {{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineAnovaOneWay}}

## Current revision as of 17:14, 2 December 2008

This page includes the information on how to access the ANOVA - One Way library via shell-based command-line interface on local machines. More information about other SOCR Analyses command-line interfaces is available here.

## Introduction

In addition to the graphical user interfaces, via a web-browser, all SOCR Analyses allow command-line shell execution on local systems.

## General Usage

• Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/).
• The command-line interface to SOCR Analyses generally uses EXAMPLE 1 from the list of example data files for the corresponding analysis.
• All Input files are ASCII (see examples within each of the specific analyses).
• a -h flag at the end of the command-line indicates that the first row in all ASCII input data files is a HEADER row (so it's not interpreted as data)

## ANOVA - One Way Usage

• Generic Setting:

 java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV [data_location]/test.txt -h 

• Example: Edit a new file (AnovaOneWayCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.

#!/bin/csh

date

java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/ cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/test.txt -h

date

exit

## Example Input data files

One test datafile is included with the SOCR analyses command-line distribution (test.txt). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.

test.txt
x y
93.0 1
67.0 1
77.0 1
92.0 1
97.0 1
62.0 1
136.0 2
120.0 2
115.0 2
121.0 2
102.0 2
130.0 2
198.0 3
217.0 3
209.0 3
221.0 3
190.0 3