SOCR EduMaterials AnalysesCommandLineAnovaOneWay

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(New page: This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html ANOVA - One Way] library via shell-based command-line interface on local machines. Mo...)
 
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* Generic Setting:
* Generic Setting:
<code>
<code>
-
java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.TwoPairSignedRankCSV [data_location]/rank1.txt [data_location]/rank2.txt -h
+
java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV [data_location]/test.txt -h
</code>
</code>
-
* Example: Edit a new file (ChiSquareModelFitCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
+
* Example: Edit a new file (AnovaOneWayCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
<code>#!/bin/csh</code>
<code>#!/bin/csh</code>
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<code>java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
<code>java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
-
cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
+
cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/test.txt -h</code>
-
stat.SOCR.analyses.command.TwoPairSignedRankCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
+
-
ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/rank1.txt /cxfs/ccb/CCB_SW_Tools/others/S
+
-
tatistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/rank2.txt -h</code>
+
<code>date</code>
<code>date</code>
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==Example Input data files==
==Example Input data files==
-
Two test datafiles are included with the SOCR analyses command-line distribution ('''rank1.txt''' and '''rank2.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
+
One test datafile is included with the SOCR analyses command-line distribution ('''test.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
<center>
<center>
{| class="wikitable" style="text-align:center" border="1" cellpadding="2"
{| class="wikitable" style="text-align:center" border="1" cellpadding="2"
|-
|-
-
! rank1.txt
+
! test.txt
-
! rank2.txt
+
!  
|-
|-
-
| Before
+
| x
-
| After
+
| y
|-
|-
-
| 27.0
+
| 93.0
-
| 25.0
+
| 1
|-
|-
-
| 29.0  
+
| 67.0  
-
| 25.0
+
| 1
|-
|-
-
| 37.0  
+
| 77.0  
-
| 27.0
+
| 1
|-
|-
-
| 56.0  
+
| 92.0  
-
| 44.0
+
| 1
|-
|-
-
| 46.0  
+
| 97.0  
-
| 30.0
+
| 1
|-
|-
-
| 82.0  
+
| 62.0  
-
| 67.0
+
| 1
|-
|-
-
| 57.0  
+
| 136.0  
-
| 53.0
+
| 2
|-
|-
-
| 80.0  
+
| 120.0  
-
| 53.0
+
| 2
|-
|-
-
| 61.0  
+
| 115.0  
-
| 52.0
+
| 2
|-
|-
-
| 59.0  
+
| 121.0  
-
| 60.0
+
| 2
|-
|-
-
| 43.0  
+
| 102.0  
-
| 28.0
+
| 2
 +
|-
 +
| 130.0  
 +
| 2
 +
|-
 +
| 198.0
 +
| 3
 +
|-
 +
| 217.0
 +
| 3
 +
|-
 +
| 209.0
 +
| 3
 +
|-
 +
| 221.0
 +
| 3
 +
|-
 +
| 190.0
 +
| 3
|}
|}
</center>
</center>
-
{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineTwoPairSignedRank}}
+
{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineAnovaOneWay}}

Current revision as of 17:14, 2 December 2008

This page includes the information on how to access the ANOVA - One Way library via shell-based command-line interface on local machines. More information about other SOCR Analyses command-line interfaces is available here.

Contents

Introduction

In addition to the graphical user interfaces, via a web-browser, all SOCR Analyses allow command-line shell execution on local systems.

General Usage

  • Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/).
  • The command-line interface to SOCR Analyses generally uses EXAMPLE 1 from the list of example data files for the corresponding analysis.
  • All Input files are ASCII (see examples within each of the specific analyses).
  • a -h flag at the end of the command-line indicates that the first row in all ASCII input data files is a HEADER row (so it's not interpreted as data)


ANOVA - One Way Usage

  • Generic Setting:

java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV [data_location]/test.txt -h

  • Example: Edit a new file (AnovaOneWayCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.

#!/bin/csh

date

java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/ cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/test.txt -h

date

exit

Example Input data files

One test datafile is included with the SOCR analyses command-line distribution (test.txt). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.

test.txt
x y
93.0 1
67.0 1
77.0 1
92.0 1
97.0 1
62.0 1
136.0 2
120.0 2
115.0 2
121.0 2
102.0 2
130.0 2
198.0 3
217.0 3
209.0 3
221.0 3
190.0 3


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