SOCR EduMaterials AnalysesCommandLineKolmogorovSmirnoff

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(New page: This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html KolmogorovSmirnoff] library via shell-based command-line interface on local machines....)
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* Generic Setting:
* Generic Setting:
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java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar:/jfreechart-1.0.5.jar edu.ucla.stat.SOCR.analyses.command.KolmogorovSmirnoffCSV [data_location]/FK.txt -h
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java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar:/jfreechart-1.0.5.jar edu.ucla.stat.SOCR.analyses.command.KolmogorovSmirnoffCSV [data_location]/KS.txt -h
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Revision as of 17:14, 2 December 2008

This page includes the information on how to access the KolmogorovSmirnoff library via shell-based command-line interface on local machines. More information about other SOCR Analyses command-line interfaces is available here.

Contents

Introduction

In addition to the graphical user interfaces, via a web-browser, all SOCR Analyses allow command-line shell execution on local systems.

General Usage

  • Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/).
  • The command-line interface to SOCR Analyses generally uses EXAMPLE 1 from the list of example data files for the corresponding analysis.
  • All Input files are ASCII (see examples within each of the specific analyses).
  • a -h flag at the end of the command-line indicates that the first row in all ASCII input data files is a HEADER row (so it's not interpreted as data)


Fliger-Killeen Usage

  • Generic Setting:

java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar:/jfreechart-1.0.5.jar edu.ucla.stat.SOCR.analyses.command.KolmogorovSmirnoffCSV [data_location]/KS.txt -h

  • Example: Edit a new file (KolmogorovSmirnoffCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.

#!/bin/csh

date

java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/ cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar:/ cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/jfreechart-1.0.5.jar edu.ucla.stat.SOCR.analyses.command.KolmogorovSmirnoffCSV /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/KS.txt -h

date

exit

Example Input data files

One test datafile is included with the SOCR analyses command-line distribution (KS.txt). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.

KS.txt
A B
0.080.11
0.10.18
0.150.23
0.170.51
0.241.19
0.341.3
0.381.32
0.421.73
0.492.06
0.52.16
0.72.37
0.942.91
0.954.5
1.264.51
1.374.66
1.5514.68
1.7514.82
3.227.44
6.9839.41
50.5741.04


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